STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115167483Y+L amino acid transporter 2. (531 aa)    
Predicted Functional Partners:
LOC115194718
4F2 cell-surface antigen heavy chain-like.
  
 0.877
ENSSTUP00000021643
annotation not available
  
 0.877
LOC115154659
4F2 cell-surface antigen heavy chain-like.
  
 0.877
LOC115204257
4F2 cell-surface antigen heavy chain-like.
  
 0.877
slc3a1
Solute carrier family 3 member 1.
  
 0.871
kiaa0513
KIAA0513 ortholog.
  
 0.804
ENSSTUP00000075260
alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
  
 0.804
ENSSTUP00000015179
annotation not available
   
 0.725
ENSSTUP00000088740
annotation not available
   
 0.725
LOC115206511
Uncharacterized LOC115206511.
   
 0.725
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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