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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp6v0cV-type proton ATPase 16 kDa proteolipid subunit. (153 aa)    
Predicted Functional Partners:
ATP6
ATP synthase F0 subunit 6.
  
 0.999
LOC115203536
V-type proton ATPase subunit d 1.
  
 0.997
LOC115198854
ATP synthase subunit gamma, mitochondrial-like.
  
 0.997
LOC115179991
ATP synthase subunit gamma, mitochondrial-like.
  
 0.997
ENSSTUP00000087113
annotation not available
  
 0.996
LOC115161138
ATP synthase subunit O, mitochondrial-like.
  
 0.995
ENSSTUP00000018589
ATP synthase peripheral stalk subunit OSCP.
  
 0.995
LOC115151812
ATP synthase subunit delta, mitochondrial-like.
  
 0.995
LOC115198928
V-type proton ATPase subunit E 1-like.
  
 0.995
LOC115197429
V-type proton ATPase subunit E 1-like.
  
 0.995
Your Current Organism:
Salmo trutta
NCBI taxonomy Id: 8032
Other names: S. trutta, river trout
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