STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000886Cell division cycle 40 homolog (S. cerevisiae). (577 aa)    
Predicted Functional Partners:
ENSGMOP00000003037
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.999
ENSGMOP00000009702
CWC22 spliceosome associated protein homolog.
   
 0.999
ENSGMOP00000018152
Coiled-coil domain containing 12.
    
  0.999
ENSGMOP00000020585
SYF2 pre-mRNA-splicing factor.
    
 0.999
ENSGMOP00000017407
SLU7 homolog, splicing factor.
   
 0.998
ENSGMOP00000002842
CWF19 like cell cycle control factor 2.
   
 0.997
ENSGMOP00000012889
YJU2 splicing factor homolog.
    
 0.997
ENSGMOP00000013901
CWC25 spliceosome associated protein homolog.
    
 0.997
ppil1
Peptidylprolyl isomerase like 1.
    
 0.997
ENSGMOP00000000404
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.995
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.