STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000006183Protocadherin-related 15b. (1830 aa)    
Predicted Functional Partners:
ENSGMOP00000009304
Cadherin-related 23.
   
0.836
ENSGMOP00000007476
annotation not available
   
0.824
ENSGMOP00000005425
Four-jointed box kinase 1.
   
 0.659
ENSGMOP00000004985
Tight junction protein 1b.
    
 0.654
ENSGMOP00000001148
LHFPL tetraspan subfamily member 4a.
   
 0.653
ENSGMOP00000003485
LHFPL tetraspan subfamily member 3.
   
 0.653
ENSGMOP00000012109
LHFPL tetraspan subfamily member 5a.
   
 0.653
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 0.653
ENSGMOP00000019886
annotation not available
   
 0.653
ENSGMOP00000005181
Usher syndrome 1C.
   
 
 0.625
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.