STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000012223DnaJ (Hsp40) homolog, subfamily C, member 5 beta. (180 aa)    
Predicted Functional Partners:
tfip11
Tuftelin interacting protein 11.
    
 
 0.844
ENSGMOP00000000404
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.840
ENSGMOP00000015149
Heat shock protein 9.
 
 0.835
LOC115561011
Heat shock 70 kDa protein-like.
 
 0.827
ENSGMOP00000021991
annotation not available
 
 0.827
HSPA2
Heat shock 70 kDa protein 1.
 
 0.825
LOC115552416
Heat shock 70 kDa protein 1-like.
 
 0.824
ENSGMOP00000021560
annotation not available
 
 0.822
ENSGMOP00000002587
Heat shock protein 5.
 
 0.821
ENSGMOP00000008146
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.820
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.