STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000016094SLIT and NTRK-like family, member 3a. (907 aa)    
Predicted Functional Partners:
ENSGMOP00000013324
Vav 3 guanine nucleotide exchange factor b.
   
 0.791
ENSGMOP00000017791
Netrin g1a.
   
 0.791
ENSGMOP00000005335
annotation not available
    
 
 0.788
ENSGMOP00000005356
Adhesion G protein-coupled receptor L3.1.
    
 
 0.788
ENSGMOP00000016327
annotation not available
    
 
 0.788
ENSGMOP00000008727
Adhesion G protein-coupled receptor L1a.
    
 
 0.782
ENSGMOP00000017296
Adhesion G protein-coupled receptor L2a.
    
 
 0.782
ENSGMOP00000000579
annotation not available
    
   0.780
ENSGMOP00000000599
annotation not available
    
   0.780
ENSGMOP00000002327
Si:ch1073-186i23.1.
    
   0.780
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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