STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105939054SUMO specific peptidase 2. (598 aa)    
Predicted Functional Partners:
nup153
Nucleoporin 153.
   
 0.975
sumo1
Small ubiquitin-related modifier.
    
 0.974
dvl3
Dishevelled segment polarity protein 3a.
    
  0.953
dvl1
Dishevelled segment polarity protein 1a.
    
  0.953
ENSFHEP00000028686
Uncharacterized protein.
    
  0.953
dvl2
Dishevelled segment polarity protein 2.
    
  0.952
ipo5
Karyopherin (importin) beta 3.
    
 
 0.948
sumo2
Small ubiquitin-related modifier.
    
 0.905
LOC105937167
Ubiquitin-like domain-containing protein.
    
 0.905
LOC105939042
Small ubiquitin like modifier 3.
    
 0.905
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.