STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105918212Mitochondrial ribosomal protein L23. (205 aa)    
Predicted Functional Partners:
mrpl13
39S ribosomal protein L13, mitochondrial.
   
 
 0.999
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.999
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.999
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.998
mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.998
ENSFHEP00000027906
Mitochondrial ribosomal protein L15.
   
 
 0.998
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.997
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.997
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.996
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.996
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.