STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usf2Upstream transcription factor 2, c-fos interacting. (309 aa)    
Predicted Functional Partners:
usf1
Upstream transcription factor 1.
  
 
0.963
ENSFHEP00000023373
Rho-GAP domain-containing protein.
    
 0.905
LOC105930854
E1A binding protein p300 a.
    
 0.649
ep300
E1A binding protein p300 b.
    
 0.649
LOC105924936
CREB binding protein b.
    
 0.609
crebbp
CREB binding protein a.
    
 0.609
ENSFHEP00000005412
Nuclear receptor coactivator 1.
    
 0.568
LOC105936476
Uncharacterized protein.
    
 0.568
NCOA3
Nuclear receptor coactivator 3.
    
 0.568
LOC105922411
Nuclear receptor coactivator 3.
    
 0.568
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.