STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105919819Ribosomal protein S6 kinase related b. (351 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.772
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.566
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 
0.552
LOC105921523
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 
0.552
sh3rf3
SH3 domain containing ring finger 3.
    
 0.548
ENSFHEP00000023599
Uncharacterized protein.
    
  0.536
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
    
0.530
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
    
0.530
map2k1
Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
0.530
LOC105937351
Myocardin related transcription factor Bb.
    
 0.515
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.