STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSFHEP00000019993Uncharacterized protein. (1068 aa)    
Predicted Functional Partners:
guca1b
Guanylate cyclase activator 1B.
   
  
 0.520
fam83h
Family with sequence similarity 83 member Hb.
  
     0.478
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
  
 0.462
lrp10
Low density lipoprotein receptor-related protein 10.
  
     0.462
RHO
Rhodopsin.
   
  
 0.449
ENSFHEP00000002936
Rhodopsin.
   
  
 0.449
LOC105924039
Rhodopsin.
   
  
 0.449
LOC105933273
Rhodopsin.
   
  
 0.449
znf513
Zinc finger protein 513a.
      
 0.443
LOC105938817
Lebercilin LCA5.
  
   
 0.438
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.