STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105926383Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)    
Predicted Functional Partners:
LOC105926368
Zgc:86598; Belongs to the protein kinase superfamily.
   
 0.992
LOC105938856
Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.
   
 0.983
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.963
rrp7a
Ribosomal RNA processing 7 homolog A.
    
 0.959
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.953
nol6
Nucleolar protein 6.
   
 0.951
LOC105919379
Protein kinase domain-containing protein.
   
 0.951
LOC105937542
Uncharacterized protein.
   
 0.950
LOC105931683
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
  
 
0.935
dvl1
Dishevelled segment polarity protein 1a.
     
 0.924
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.