STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105935190Solute carrier family 22 member 23. (787 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.892
LOC105920223
Malate synthase-like.
   
 
 0.786
pla2g4a
Phospholipase A2.
    
 0.722
ints9
Integrator complex subunit 9.
    
 0.556
ints1
Integrator complex subunit 1.
    
 0.553
ints11
Integrator complex subunit 11.
    
 0.546
ints4
Integrator complex subunit 4.
    
 0.540
ints3
Integrator complex subunit 3.
    
 0.539
ints7
Integrator complex subunit 7.
    
 0.538
ints13
Integrator complex subunit 13.
    
 0.536
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.