STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBMS3-2RNA binding motif single stranded interacting protein 3. (136 aa)    
Predicted Functional Partners:
spo11
SPO11 initiator of meiotic double stranded breaks.
      
 0.536
LOC105939516
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b.
     
 0.509
p4ha2
Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2.
      
 0.494
cirbp
Cold inducible RNA binding protein b.
  
 
 
 0.459
rbmx
RNA binding motif protein X-linked.
  
 
 
 0.443
ENSFHEP00000005821
RRM domain-containing protein.
  
   
 0.430
tra2a
Transformer 2 beta homolog.
  
 
   0.429
LOC105934929
RNA binding fox-1 homolog 1, like.
  
 
   0.421
tra2b
Transformer 2 beta homolog.
  
 
   0.414
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
  
 
   0.413
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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