STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105927382Ankyrin repeat and SOCS box-containing 12a. (318 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
 
  
  0.765
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
  0.728
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.717
LOC105925562
Uncharacterized protein.
 
   
  0.714
mtmr2
Myotubularin related protein 2.
 
   
  0.714
mtmr3
Myotubularin related protein 3.
 
   
  0.714
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.692
commd8
COMM domain containing 8.
    
  0.682
ASB6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.676
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.674
Your Current Organism:
Fundulus heteroclitus
NCBI taxonomy Id: 8078
Other names: Atlantic killifish, F. heteroclitus, killifish, mummichog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.