Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102224037 | atr | ENSXMAP00000001234 | ENSXMAP00000009308 | Checkpoint kinase 2. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.953 |
LOC102224037 | luzp2 | ENSXMAP00000001234 | ENSXMAP00000000008 | Checkpoint kinase 2. | Leucine zipper protein 2. | 0.554 |
LOC102224037 | rfx4 | ENSXMAP00000001234 | ENSXMAP00000001649 | Checkpoint kinase 2. | Regulatory factor X, 4. | 0.578 |
atr | LOC102224037 | ENSXMAP00000009308 | ENSXMAP00000001234 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Checkpoint kinase 2. | 0.953 |
atr | luzp2 | ENSXMAP00000009308 | ENSXMAP00000000008 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Leucine zipper protein 2. | 0.606 |
atr | rfx4 | ENSXMAP00000009308 | ENSXMAP00000001649 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Regulatory factor X, 4. | 0.614 |
ggps1 | rfx4 | ENSXMAP00000006571 | ENSXMAP00000001649 | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Regulatory factor X, 4. | 0.499 |
ggps1 | rp2 | ENSXMAP00000006571 | ENSXMAP00000016028 | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. | 0.631 |
gmnc | rfx4 | ENSXMAP00000038189 | ENSXMAP00000001649 | Uncharacterized protein. | Regulatory factor X, 4. | 0.497 |
luzp2 | LOC102224037 | ENSXMAP00000000008 | ENSXMAP00000001234 | Leucine zipper protein 2. | Checkpoint kinase 2. | 0.554 |
luzp2 | atr | ENSXMAP00000000008 | ENSXMAP00000009308 | Leucine zipper protein 2. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.606 |
luzp2 | rfx4 | ENSXMAP00000000008 | ENSXMAP00000001649 | Leucine zipper protein 2. | Regulatory factor X, 4. | 0.613 |
luzp2 | rfxank | ENSXMAP00000000008 | ENSXMAP00000034268 | Leucine zipper protein 2. | Regulatory factor X-associated ankyrin-containing protein. | 0.907 |
luzp2 | rfxap | ENSXMAP00000000008 | ENSXMAP00000037287 | Leucine zipper protein 2. | Regulatory factor X-associated protein. | 0.514 |
mnx1 | rfx4 | ENSXMAP00000033592 | ENSXMAP00000001649 | Motor neuron and pancreas homeobox 1. | Regulatory factor X, 4. | 0.468 |
mnx1 | tbx20 | ENSXMAP00000033592 | ENSXMAP00000004727 | Motor neuron and pancreas homeobox 1. | T-box transcription factor 20. | 0.569 |
rfx4 | LOC102224037 | ENSXMAP00000001649 | ENSXMAP00000001234 | Regulatory factor X, 4. | Checkpoint kinase 2. | 0.578 |
rfx4 | atr | ENSXMAP00000001649 | ENSXMAP00000009308 | Regulatory factor X, 4. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.614 |
rfx4 | ggps1 | ENSXMAP00000001649 | ENSXMAP00000006571 | Regulatory factor X, 4. | Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.499 |
rfx4 | gmnc | ENSXMAP00000001649 | ENSXMAP00000038189 | Regulatory factor X, 4. | Uncharacterized protein. | 0.497 |
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