STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traf3ip2SEFIR domain-containing protein. (414 aa)    
Predicted Functional Partners:
LOC102217271
TRAF3 interacting protein 2-like.
     
 
0.900
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.769
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.607
mst1r
Macrophage stimulating 1 receptor b.
    
  0.564
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.564
LOC102220769
Macrophage stimulating 1 receptor a.
    
  0.564
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.528
LOC102216520
ANK_REP_REGION domain-containing protein.
    
 0.521
birc6
Baculoviral IAP repeat containing 6.
   
 0.496
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.488
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: medium (44%) [HD]