STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGS1Prostaglandin-endoperoxide synthase 1. (595 aa)    
Predicted Functional Partners:
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
   
 
 0.936
ptges
Prostaglandin E synthase.
     
 0.935
ptges2
Prostaglandin E synthase 2-like.
     
 0.926
ptgs2
Prostaglandin-endoperoxide synthase 2b.
  
0.924
LOC102220792
Uncharacterized protein.
   
 
 0.923
LOC102220683
Prostaglandin E synthase 3a (cytosolic).
     
 0.920
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
 0.920
LOC102224227
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.916
LOC102218429
Prostaglandin I2 (prostacyclin) synthase; Belongs to the cytochrome P450 family.
   
 0.916
LOC102228717
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
     
 0.915
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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