STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (133 aa)    
Predicted Functional Partners:
dscc1
DNA replication and sister chromatid cohesion 1.
   
 0.999
chtf18
AAA domain-containing protein.
   
 0.996
rfc5
Replication factor C (activator 1) 5.
   
 0.953
rfc4
Replication factor C (activator 1) 4.
   
 0.953
rfc3
Replication factor C (activator 1) 3.
   
 0.918
rfc2
Replication factor C (activator 1) 2.
   
 0.915
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.913
rad17
RAD17 checkpoint clamp loader component.
   
 0.838
timeless
Timeless circadian clock.
    
 
 0.824
ddx11
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11.
   
 
 0.817
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.