STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102224478RHD domain-containing protein. (933 aa)    
Predicted Functional Partners:
ppp3r1
Protein phosphatase 3 regulatory subunit B, alpha.
    
 0.991
LOC102217279
Serine/threonine-protein phosphatase.
    
 0.967
PPP3CA
Serine/threonine-protein phosphatase.
    
 0.967
LOC102235928
Serine/threonine-protein phosphatase.
    
 0.967
LOC102231182
Serine/threonine-protein phosphatase.
    
 0.967
LOC102229803
Serine/threonine-protein phosphatase.
    
 0.967
LOC102237237
Mitogen-activated protein kinase.
    
 0.939
mapk10
Mitogen-activated protein kinase.
    
 0.938
mapk8
Mitogen-activated protein kinase.
    
 0.938
LOC102234094
Mitogen-activated protein kinase.
    
 0.938
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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