STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pax5Paired box 5. (425 aa)    
Predicted Functional Partners:
LOC102219412
Uncharacterized protein.
    
 
 0.678
foxa2
Forkhead box A2.
      
 0.672
gsc
Goosecoid.
    
 
 0.579
LOC102219250
Uncharacterized protein.
   
 
 0.536
LOC102229292
Ets variant 2.
   
 
 0.536
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
   
 
 0.536
LOC102230567
Runt-related transcription factor.
    
 0.498
LOC102223887
Runt-related transcription factor.
    
 0.494
LOC102236639
Runt-related transcription factor.
    
 0.494
cbfb
Core-binding factor subunit beta.
     
 0.483
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.