STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (795 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.698
LOC102226016
Junction plakoglobin a.
    
 0.666
ARVCF
ARVCF delta catenin family member b.
   
 0.586
CTNND1
Catenin delta 1.
   
 0.586
LOC102237360
Catenin (cadherin-associated protein), delta 1.
   
 0.586
LOC102234936
Uncharacterized protein.
    
 0.585
sh3bp5l
SH3-binding domain protein 5-like, a.
      
 0.560
LOC102224576
Cadherin 12, type 2a (N-cadherin 2); Cadherins are calcium-dependent cell adhesion proteins.
     
0.549
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.549
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.549
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.