Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ESRRB | LOC102226844 | ENSXMAP00000030195 | ENSXMAP00000019216 | Estrogen-related receptor beta. | Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. | 0.585 |
ESRRB | LOC102229141 | ENSXMAP00000030195 | ENSXMAP00000001286 | Estrogen-related receptor beta. | POU domain protein. | 0.651 |
ESRRB | LOC102237096 | ENSXMAP00000030195 | ENSXMAP00000036879 | Estrogen-related receptor beta. | Estrogen-related receptor alpha. | 0.541 |
ESRRB | NR0B1 | ENSXMAP00000030195 | ENSXMAP00000011278 | Estrogen-related receptor beta. | Nuclear receptor subfamily 0 group B member 1. | 0.519 |
ESRRB | klf4 | ENSXMAP00000030195 | ENSXMAP00000014151 | Estrogen-related receptor beta. | Kruppel-like factor 4. | 0.580 |
ESRRB | med1 | ENSXMAP00000030195 | ENSXMAP00000025722 | Estrogen-related receptor beta. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.529 |
ESRRB | ncor1 | ENSXMAP00000030195 | ENSXMAP00000005421 | Estrogen-related receptor beta. | Nuclear receptor corepressor 1. | 0.626 |
ESRRB | ncor2 | ENSXMAP00000030195 | ENSXMAP00000034334 | Estrogen-related receptor beta. | Nuclear receptor corepressor 2. | 0.626 |
ESRRB | nrip1 | ENSXMAP00000030195 | ENSXMAP00000023124 | Estrogen-related receptor beta. | Nuclear receptor interacting protein 1b. | 0.660 |
ESRRB | ppargc1a | ENSXMAP00000030195 | ENSXMAP00000007781 | Estrogen-related receptor beta. | Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha. | 0.836 |
LOC102226844 | ESRRB | ENSXMAP00000019216 | ENSXMAP00000030195 | Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. | Estrogen-related receptor beta. | 0.585 |
LOC102226844 | LOC102237096 | ENSXMAP00000019216 | ENSXMAP00000036879 | Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. | Estrogen-related receptor alpha. | 0.864 |
LOC102229141 | ESRRB | ENSXMAP00000001286 | ENSXMAP00000030195 | POU domain protein. | Estrogen-related receptor beta. | 0.651 |
LOC102229141 | NR0B1 | ENSXMAP00000001286 | ENSXMAP00000011278 | POU domain protein. | Nuclear receptor subfamily 0 group B member 1. | 0.469 |
LOC102229141 | klf4 | ENSXMAP00000001286 | ENSXMAP00000014151 | POU domain protein. | Kruppel-like factor 4. | 0.482 |
LOC102237096 | ESRRB | ENSXMAP00000036879 | ENSXMAP00000030195 | Estrogen-related receptor alpha. | Estrogen-related receptor beta. | 0.541 |
LOC102237096 | LOC102226844 | ENSXMAP00000036879 | ENSXMAP00000019216 | Estrogen-related receptor alpha. | Peroxisome proliferator-activated receptor gamma, coactivator 1 beta. | 0.864 |
LOC102237096 | NR0B1 | ENSXMAP00000036879 | ENSXMAP00000011278 | Estrogen-related receptor alpha. | Nuclear receptor subfamily 0 group B member 1. | 0.411 |
LOC102237096 | med1 | ENSXMAP00000036879 | ENSXMAP00000025722 | Estrogen-related receptor alpha. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.559 |
LOC102237096 | ncor1 | ENSXMAP00000036879 | ENSXMAP00000005421 | Estrogen-related receptor alpha. | Nuclear receptor corepressor 1. | 0.662 |
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