STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102221439Uncharacterized protein. (833 aa)    
Predicted Functional Partners:
nos1
Nitric oxide synthase 1 (neuronal).
    
 
 0.677
LOC102232835
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
 
 
 
 0.676
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
   
 
 0.676
LOC102219145
Cytochrome b-245, alpha polypeptide.
   
  
 0.675
tdo2
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
      
 0.672
LOC102232929
Cytochrome c-1.
      
 0.672
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
      
 0.672
M3ZP24_XIPMA
Eosinophil peroxidase.
  
  
 
0.414
LOC102221624
Peroxiredoxin 1.
      
 0.414
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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