Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102222228 | M4AE11_XIPMA | ENSXMAP00000027196 | ENSXMAP00000012705 | Uncharacterized protein. | Nuclear receptor subfamily 1, group H, member 5. | 0.803 |
LOC102222228 | PPARA | ENSXMAP00000027196 | ENSXMAP00000009689 | Uncharacterized protein. | Peroxisome proliferator-activated receptor alpha b. | 0.739 |
LOC102222228 | PPARG | ENSXMAP00000027196 | ENSXMAP00000017378 | Uncharacterized protein. | Peroxisome proliferator activated receptor gamma. | 0.739 |
LOC102222228 | med1 | ENSXMAP00000027196 | ENSXMAP00000025722 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.775 |
LOC102222228 | ncoa2 | ENSXMAP00000027196 | ENSXMAP00000010286 | Uncharacterized protein. | Nuclear receptor coactivator. | 0.724 |
LOC102222228 | ncor1 | ENSXMAP00000027196 | ENSXMAP00000005421 | Uncharacterized protein. | Nuclear receptor corepressor 1. | 0.793 |
LOC102222228 | ncor2 | ENSXMAP00000027196 | ENSXMAP00000034334 | Uncharacterized protein. | Nuclear receptor corepressor 2. | 0.793 |
LOC102222228 | nr1h3 | ENSXMAP00000027196 | ENSXMAP00000039409 | Uncharacterized protein. | Nuclear receptor subfamily 1, group H, member 3. | 0.924 |
LOC102222228 | nr1h4 | ENSXMAP00000027196 | ENSXMAP00000001448 | Uncharacterized protein. | Nuclear receptor subfamily 1, group H, member 4. | 0.803 |
LOC102222228 | ppard | ENSXMAP00000027196 | ENSXMAP00000027416 | Uncharacterized protein. | Peroxisome proliferator-activated receptor delta b. | 0.752 |
M4AE11_XIPMA | LOC102222228 | ENSXMAP00000012705 | ENSXMAP00000027196 | Nuclear receptor subfamily 1, group H, member 5. | Uncharacterized protein. | 0.803 |
M4AE11_XIPMA | med1 | ENSXMAP00000012705 | ENSXMAP00000025722 | Nuclear receptor subfamily 1, group H, member 5. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.799 |
M4AE11_XIPMA | ncoa2 | ENSXMAP00000012705 | ENSXMAP00000010286 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor coactivator. | 0.763 |
M4AE11_XIPMA | ncor1 | ENSXMAP00000012705 | ENSXMAP00000005421 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor corepressor 1. | 0.816 |
M4AE11_XIPMA | ncor2 | ENSXMAP00000012705 | ENSXMAP00000034334 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor corepressor 2. | 0.816 |
PPARA | LOC102222228 | ENSXMAP00000009689 | ENSXMAP00000027196 | Peroxisome proliferator-activated receptor alpha b. | Uncharacterized protein. | 0.739 |
PPARA | med1 | ENSXMAP00000009689 | ENSXMAP00000025722 | Peroxisome proliferator-activated receptor alpha b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.887 |
PPARA | ncoa2 | ENSXMAP00000009689 | ENSXMAP00000010286 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor coactivator. | 0.691 |
PPARA | ncor1 | ENSXMAP00000009689 | ENSXMAP00000005421 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor corepressor 1. | 0.782 |
PPARA | ncor2 | ENSXMAP00000009689 | ENSXMAP00000034334 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor corepressor 2. | 0.782 |
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