STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpd2Glycerol-3-phosphate dehydrogenase 2 (mitochondrial). (727 aa)    
Predicted Functional Partners:
tkfc
Triokinase/FMN cyclase.
    
 0.989
gk
Uncharacterized protein; Belongs to the FGGY kinase family.
 0.975
LOC101157895
Uncharacterized protein; Belongs to the FGGY kinase family.
 0.957
xylb
Xylulokinase homolog (H. influenzae).
  
 
 0.954
LOC101156981
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
    
 0.944
LOC101166180
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
    
 0.944
gnpat
Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.944
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
    
 0.944
LOC101169635
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.933
GPAT4
PlsC domain-containing protein.
  
 
 0.923
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.