STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb4Ankyrin repeat and SOCS box containing 4. (470 aa)    
Predicted Functional Partners:
Asb14
Ankyrin repeat and SOCS box containing 14a.
  
 
 0.644
wdr6
WD repeat domain 6.
   
 
 0.569
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.515
LOC101171914
Fleer.
    
 0.501
LOC101164724
Ankyrin repeat and SOCS box containing 14b.
  
 
0.500
asb6
Ankyrin repeat and SOCS box containing 6.
     
 0.499
ift81
Intraflagellar transport 81 homolog.
    
 0.496
asb15
Ankyrin repeat and SOCS box containing 15b.
  
 
0.488
cluap1
Clusterin associated protein 1.
    
 0.481
H2M614_ORYLA
ANK_REP_REGION domain-containing protein.
  
 
 0.479
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.