Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101155255 | LOC101157651 | ENSORLP00000033837 | ENSORLP00000029100 | Basonuclin 2. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.459 |
LOC101155255 | TBX6 | ENSORLP00000033837 | ENSORLP00000007878 | Basonuclin 2. | T-box transcription factor 6. | 0.400 |
LOC101155255 | ajap1 | ENSORLP00000033837 | ENSORLP00000044703 | Basonuclin 2. | Adherens junctions associated protein 1. | 0.568 |
LOC101155255 | kif6 | ENSORLP00000033837 | ENSORLP00000022255 | Basonuclin 2. | Kinesin family member 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.503 |
LOC101155255 | lbx1 | ENSORLP00000033837 | ENSORLP00000015925 | Basonuclin 2. | Ladybird homeobox 1. | 0.581 |
LOC101155255 | pax1 | ENSORLP00000033837 | ENSORLP00000021775 | Basonuclin 2. | Paired-box transcription factor pax1. | 0.501 |
LOC101155255 | poc5 | ENSORLP00000033837 | ENSORLP00000035424 | Basonuclin 2. | POC5 centriolar protein homolog (Chlamydomonas). | 0.522 |
LOC101155255 | tshz3 | ENSORLP00000033837 | ENSORLP00000026766 | Basonuclin 2. | Teashirt zinc finger homeobox 3b. | 0.404 |
LOC101157651 | LOC101155255 | ENSORLP00000029100 | ENSORLP00000033837 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Basonuclin 2. | 0.459 |
LOC101157651 | ajap1 | ENSORLP00000029100 | ENSORLP00000044703 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Adherens junctions associated protein 1. | 0.582 |
LOC101157651 | pax1 | ENSORLP00000029100 | ENSORLP00000021775 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Paired-box transcription factor pax1. | 0.501 |
LOC101157651 | poc5 | ENSORLP00000029100 | ENSORLP00000035424 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | POC5 centriolar protein homolog (Chlamydomonas). | 0.568 |
TBX6 | LOC101155255 | ENSORLP00000007878 | ENSORLP00000033837 | T-box transcription factor 6. | Basonuclin 2. | 0.400 |
ajap1 | LOC101155255 | ENSORLP00000044703 | ENSORLP00000033837 | Adherens junctions associated protein 1. | Basonuclin 2. | 0.568 |
ajap1 | LOC101157651 | ENSORLP00000044703 | ENSORLP00000029100 | Adherens junctions associated protein 1. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.582 |
ajap1 | pax1 | ENSORLP00000044703 | ENSORLP00000021775 | Adherens junctions associated protein 1. | Paired-box transcription factor pax1. | 0.436 |
ajap1 | poc5 | ENSORLP00000044703 | ENSORLP00000035424 | Adherens junctions associated protein 1. | POC5 centriolar protein homolog (Chlamydomonas). | 0.607 |
kif6 | LOC101155255 | ENSORLP00000022255 | ENSORLP00000033837 | Kinesin family member 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Basonuclin 2. | 0.503 |
kif6 | lbx1 | ENSORLP00000022255 | ENSORLP00000015925 | Kinesin family member 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Ladybird homeobox 1. | 0.400 |
kif6 | pax1 | ENSORLP00000022255 | ENSORLP00000021775 | Kinesin family member 6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Paired-box transcription factor pax1. | 0.440 |
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