STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174183Aryl hydrocarbon receptor nuclear translocator-like 2. (637 aa)    
Predicted Functional Partners:
LOC101172430
Neuronal PAS domain protein 2.
   
0.838
LOC101168329
Cryptochrome DASH.
   
 0.821
LOC101165450
Clock circadian regulator b.
   
0.813
CLOCK
Clock circadian regulator a.
   
0.813
LOC101174729
Aryl hydrocarbon receptor 2.
   
0.811
ahr
Uncharacterized protein.
   
0.811
LOC101170061
Uncharacterized protein.
   
0.811
LOC101170311
Uncharacterized protein.
   
0.811
ahrr
Uncharacterized protein.
   
0.811
LOC101173389
Cryptochrome circadian regulator 2.
   
 0.796
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.