STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162142Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (435 aa)    
Predicted Functional Partners:
oaz1
Ornithine decarboxylase antizyme 1a.
    
 0.896
LOC101156026
Ornithine decarboxylase antizyme 1b.
    
 0.896
LOC101159818
Ornithine decarboxylase antizyme 2a.
    
 0.864
aass
Aminoadipate-semialdehyde synthase.
  
 
 0.772
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.741
agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.718
sms
Spermine synthase.
  
 0.705
LOC101169240
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.703
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.703
arg2
Arginase.
  
 
 0.684
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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