STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr5a1FTZ-F1. (486 aa)    
Predicted Functional Partners:
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
   
0.902
dax1
NR LBD domain-containing protein.
    
0.846
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.822
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 
 0.776
wt1-2
Uncharacterized protein.
    
 0.739
sox9
HMG box domain-containing protein.
    
 0.734
wt1
Uncharacterized protein.
    
 0.682
LOC101175434
Nuclear receptor coactivator.
    
 0.678
ncoa2
Nuclear receptor coactivator.
    
 0.678
NCOA3
Nuclear receptor coactivator.
    
 0.678
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.