STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hivep2Human immunodeficiency virus type I enhancer binding protein 2a. (2352 aa)    
Predicted Functional Partners:
SLC22A23
Solute carrier family 22 member 23.
    
 
 0.611
fuca2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.603
snx9
Sorting nexin.
      
 0.602
LOC101157260
Taxilin beta b.
      
 0.579
ttbk1
Tau tubulin kinase 1a.
    
 0.505
LOC101161658
Allograft inflammatory factor 1-like.
    
 0.447
AIF1
Allograft inflammatory factor 1.
    
 0.447
igf2r
Insulin-like growth factor 2 receptor.
     
 0.445
slc22a31
Solute carrier family 22 member 31.
    
 
 0.424
pou2f1
POU domain protein.
    
 0.421
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.