STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pogzPogo transposable element derived with ZNF domain a. (1271 aa)    
Predicted Functional Partners:
LOC101169703
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.733
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.733
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.733
H2N1M3_ORYLA
PWWP domain-containing protein.
    
 
 0.637
LOC101157666
LEDGF domain-containing protein.
    
 
 0.637
LOC105357989
LEDGF domain-containing protein.
    
 
 0.637
mphosph8
Uncharacterized protein.
   
 0.483
adcy9
CREB binding protein b.
   
  0.469
LOC101163392
CREB binding protein a.
   
  0.469
H2LDS1_ORYLA
Chromo domain-containing protein.
   
 0.442
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.