STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165497Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
LOC101174330
PCI domain-containing protein.
    
  0.457
LOC101174707
Proteasome 26S subunit, non-ATPase 11b.
    
  0.457
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
  0.448
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
    
  0.448
psma4
Proteasome subunit alpha type.
    
  0.429
psmb1
Proteasome subunit beta.
    
  0.429
gak
Cyclin G associated kinase.
    
 0.421
tubgcp4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.420
psma2
Proteasome subunit alpha type.
    
  0.406
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.