STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158328Zgc:85777. (431 aa)    
Predicted Functional Partners:
eci2
Enoyl-CoA delta isomerase 2.
  
 0.890
etfa
Electron transfer flavoprotein subunit alpha.
  
 0.844
etfb
Electron transfer flavoprotein subunit beta.
  
 0.831
hadh
Hydroxyacyl-CoA dehydrogenase.
 
 0.763
LOC101173617
Malate synthase-like.
  
  
 0.758
echs1
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.735
ECHDC1
Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.735
LOC101159952
Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.735
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.728
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.725
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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