STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kitMast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (983 aa)    
Predicted Functional Partners:
kitlg
Kit ligand a.
   
 0.995
LOC111581874
Uncharacterized protein.
     
 0.954
grb2
Growth factor receptor-bound protein 2b.
   
 0.952
hras
HRas proto-oncogene, GTPase a.
    
 0.945
LOC111565328
Zgc:55558.
    
 0.943
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
    
 0.943
il34
Interleukin 34.
   
 0.937
LOC111576847
Colony stimulating factor 1b (macrophage).
   
 0.937
LOC111569809
Mast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
  
  
 
0.901
LOC111584045
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.800
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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