STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3IW97_ORENITUB like protein 4b; Belongs to the TUB family. (1794 aa)    
Predicted Functional Partners:
eprs1
Glutamyl-prolyl-tRNA synthetase.
      
 0.702
LOC100703753
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.680
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.680
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.652
I3KDW2_ORENI
Uncharacterized protein.
      
 0.652
rnf7
Ring finger protein 7.
    
  0.648
gtf2h5
General transcription factor IIH, polypeptide 5.
      
 0.636
cand1
Cullin-associated and neddylation-dissociated 1.
   
 
 0.622
I3JCU3_ORENI
TIP120 domain-containing protein.
   
 
 0.622
kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.614
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.