STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706200Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
aff4
AF4/FMR2 family, member 4.
    
 0.961
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.870
ice2
Interactor of little elongator complex ELL subunit 2.
    
 0.864
ell2
Elongation factor, RNA polymerase II, 2.
     
  0.812
LOC100703490
Uncharacterized protein.
     
  0.784
LOC100692326
Si:ch211-13k12.2.
     
  0.784
LOC100694205
MLLT3 super elongation complex subunit.
    
 0.779
I3JUU4_ORENI
MLLT1 super elongation complex subunit a.
    
 0.779
eaf1
ELL associated factor 1.
    
 0.771
eaf2
ELL associated factor 2.
    
 0.769
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.