STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708121ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited). (1846 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.738
I3KP93_ORENI
Zgc:171459.
    
 0.738
sec63
SEC63 homolog, protein translocation regulator.
   
  
 0.710
ENSONIP00000026111
ADP-ribosylation factor 6b.
   
 0.643
Gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
   
 
0.639
LOC102075886
Uncharacterized LOC102075886.
    
 0.638
ENSONIP00000076370
annotation not available
    
 0.638
LOC100701022
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.551
Mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
0.516
arl15
ADP-ribosylation factor-like protein 15 isoform X4.
   
 0.500
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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