STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J0E9_ORENIZinc finger RNA binding protein 2. (810 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 
0.680
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
      
 0.482
Vegfb
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
      
 0.472
ptgs2
Prostaglandin-endoperoxide synthase 2b.
      
 0.463
PTPN14
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 
 0.446
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.437
klhl6
BTB domain-containing protein.
   
  
 0.436
LOC100709898
Uncharacterized protein.
      
 0.424
edn1
Endothelin 1.
      
 0.420
slu7
SLU7 homolog, splicing factor.
   
  
 0.405
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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