STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3J1E7_ORENISelectin P. (991 aa)    
Predicted Functional Partners:
ENSONIP00000033878
P-selectin glycoprotein ligand 1.
   
 0.756
snx17
Sorting nexin 17.
    
 
 0.623
I3KB63_ORENI
Link domain-containing protein.
   
 0.586
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
  
 0.542
LOC102077463
Hematopoietic progenitor cell antigen CD34.
   
 
 0.541
il34
Interleukin 34.
      
 0.480
I3JXJ9_ORENI
Golgi glycoprotein 1a.
    
 0.451
ENSONIP00000056241
LOW QUALITY PROTEIN: Golgi apparatus protein 1.
    
 0.451
LOC100701703
Golgi glycoprotein 1b.
    
 0.451
ap2m1
AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]
    
  0.446
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.