STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705827Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (274 aa)    
Predicted Functional Partners:
LOC102083126
Uncharacterized protein.
    
 0.999
LOC109204105
Tumor necrosis factor receptor superfamily member 6B isoform X1.
    
 0.989
LOC100691514
Uncharacterized protein.
    
 0.989
Fadd
Uncharacterized protein.
    
 0.960
LOC100703882
Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family.
   
 
 0.950
LOC100710188
Uncharacterized protein.
    
  0.906
LOC100702139
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.900
ENSONIP00000059106
annotation not available
    
 0.896
LOC100697530
Tumor necrosis factor receptor superfamily, member a.
    
 0.888
LOC109194206
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.883
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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