STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyldCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (956 aa)    
Predicted Functional Partners:
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.982
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.959
spata2
Spermatogenesis associated 2.
     
 0.954
I3K566_ORENI
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.938
bcl3
B-cell CLL/lymphoma protein 3.
   
 0.925
LOC109194206
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.920
LOC100702139
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.920
I3KF49_ORENI
Caspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.915
spata2l
Spermatogenesis associated 2-like.
    
 0.911
LOC102082454
Spermatogenesis-associated protein 2.
     
  0.900
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.