STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695517Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family. (976 aa)    
Predicted Functional Partners:
LOC100534494
Alpha-amylase.
  
 
 0.928
LOC109194289
Alpha-amylase.
  
 
 0.928
LOC100709447
Glucosidase, beta, acid 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
  
 0.926
gla
Alpha-galactosidase.
     
 0.917
LOC100694159
Hexokinase 2.
   
 
 0.915
HK1
Hexokinase 1.
   
 
 0.915
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.903
prkcsh
Protein kinase C substrate 80K-H.
   
 0.688
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.688
LOC100691113
EF-hand domain-containing protein.
   
 0.688
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.