STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A2Solute carrier family 16 member 2. (564 aa)    
Predicted Functional Partners:
LOC100695464
Solute carrier organic anion transporter family member.
   
 
 0.781
SLCO1C1
Solute carrier organic anion transporter family member.
   
 
 0.781
I3KXG6_ORENI
Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine).
   
  
 0.604
Dio2
Type II iodothyronine deiodinase.
   
  
 0.604
emb
Embigin.
    
 0.559
SLCO5A1
Solute carrier organic anion transporter family member.
   
 
 0.491
LOC100693652
Solute carrier organic anion transporter family member.
   
 
 0.491
slco4a1
Solute carrier organic anion transporter family member.
   
 
 0.491
LOC100694336
Solute carrier family 7 member 3a.
      
 0.434
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.