STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700256Cryptochrome DASH. (521 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
    
 0.763
PER2
Period circadian regulator 2.
   
 0.744
LOC100689707
Period circadian clock 2.
   
 0.742
LOC100711812
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.740
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.740
LOC100691220
Neuronal PAS domain protein 2.
    
 0.726
LOC100690808
Period circadian clock 3.
   
 0.725
LOC100695408
Period circadian clock 1b.
   
 0.714
fbxl15
F-box and leucine-rich repeat protein 15.
    
 0.605
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.592
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.