scube2 protein (Oreochromis niloticus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

scube2

Signal peptide, CUB domain, EGF-like 2. (1020 aa)

Predicted Functional Partners:

mmp9

0.637

I3JV04_ORENI

0.570

arid4a

0.570

shh

0.557

Irx3

0.474

ush1c

0.466

hhat

0.461

ENSONIP00000038349

0.436

sall4

0.434

LOC100707106

0.427

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000038349	scube2	ENSONIP00000038349	ENSONIP00000007670	RING finger protein 223.	Signal peptide, CUB domain, EGF-like 2.	0.436
I3JV04_ORENI	Irx3	ENSONIP00000012699	ENSONIP00000003520	Translocase of outer mitochondrial membrane 20.	Iroquois homeobox 3a.	0.613
I3JV04_ORENI	arid4a	ENSONIP00000012699	ENSONIP00000036931	Translocase of outer mitochondrial membrane 20.	AT rich interactive domain 4A (RBP1-like).	0.626
I3JV04_ORENI	sall4	ENSONIP00000012699	ENSONIP00000020852	Translocase of outer mitochondrial membrane 20.	Spalt-like transcription factor 4.	0.569
I3JV04_ORENI	scube2	ENSONIP00000012699	ENSONIP00000007670	Translocase of outer mitochondrial membrane 20.	Signal peptide, CUB domain, EGF-like 2.	0.570
I3JV04_ORENI	ush1c	ENSONIP00000012699	ENSONIP00000062032	Translocase of outer mitochondrial membrane 20.	USH1 protein network component harmonin.	0.569
Irx3	I3JV04_ORENI	ENSONIP00000003520	ENSONIP00000012699	Iroquois homeobox 3a.	Translocase of outer mitochondrial membrane 20.	0.613
Irx3	arid4a	ENSONIP00000003520	ENSONIP00000036931	Iroquois homeobox 3a.	AT rich interactive domain 4A (RBP1-like).	0.613
Irx3	sall4	ENSONIP00000003520	ENSONIP00000020852	Iroquois homeobox 3a.	Spalt-like transcription factor 4.	0.678
Irx3	scube2	ENSONIP00000003520	ENSONIP00000007670	Iroquois homeobox 3a.	Signal peptide, CUB domain, EGF-like 2.	0.474
Irx3	ush1c	ENSONIP00000003520	ENSONIP00000062032	Iroquois homeobox 3a.	USH1 protein network component harmonin.	0.688
LOC100707106	scube2	ENSONIP00000006744	ENSONIP00000007670	Recombination signal binding protein for immunoglobulin kappa J region-like.	Signal peptide, CUB domain, EGF-like 2.	0.427
arid4a	I3JV04_ORENI	ENSONIP00000036931	ENSONIP00000012699	AT rich interactive domain 4A (RBP1-like).	Translocase of outer mitochondrial membrane 20.	0.626
arid4a	Irx3	ENSONIP00000036931	ENSONIP00000003520	AT rich interactive domain 4A (RBP1-like).	Iroquois homeobox 3a.	0.613
arid4a	sall4	ENSONIP00000036931	ENSONIP00000020852	AT rich interactive domain 4A (RBP1-like).	Spalt-like transcription factor 4.	0.569
arid4a	scube2	ENSONIP00000036931	ENSONIP00000007670	AT rich interactive domain 4A (RBP1-like).	Signal peptide, CUB domain, EGF-like 2.	0.570
arid4a	ush1c	ENSONIP00000036931	ENSONIP00000062032	AT rich interactive domain 4A (RBP1-like).	USH1 protein network component harmonin.	0.569
hhat	scube2	ENSONIP00000001303	ENSONIP00000007670	Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family.	Signal peptide, CUB domain, EGF-like 2.	0.461
hhat	shh	ENSONIP00000001303	ENSONIP00000007484	Hedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.698
mmp9	scube2	ENSONIP00000049921	ENSONIP00000007670	Matrix metallopeptidase 9.	Signal peptide, CUB domain, EGF-like 2.	0.637