STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100690375Protein YIPF. (305 aa)    
Predicted Functional Partners:
yipf4
Protein YIPF.
   
 
 0.788
yipf6
Protein YIPF.
   
 
 0.787
yipf5
Protein YIPF.
   
 
 0.717
yif1b
Yip1 interacting factor homolog B (S. cerevisiae).
   
  
 0.709
selenos
Selenoprotein S.
   
 
 0.707
yipf3
Yip1 domain family, member 3.
   
  
 0.702
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.623
tvp23b
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.623
I3JCZ3_ORENI
Golgi apparatus membrane protein TVP23 homolog.
   
 
 0.623
Slc38a7
Solute carrier family 38 member 7.
      
 0.595
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.