STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698193Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (282 aa)    
Predicted Functional Partners:
LOC100691172
Anion exchange protein.
   
 
 0.631
LOC100705836
Anion exchange protein.
   
 
 0.622
I3JAH2_ORENI
Anion exchange protein.
   
 
 0.610
rpf2
Ribosome production factor 2 homolog.
   
 
 0.577
METAP2
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
   
  
 0.545
METAP2-2
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
   
  
 0.545
ca7
Carbonic anhydrase VII; Belongs to the alpha-carbonic anhydrase family.
  
  
0.544
rnf151
Ring finger protein 151.
   
  
 0.521
slc4a2
Anion exchange protein.
   
 
 0.497
I3JYD6_ORENI
Calcineurin binding protein 1.
   
  
 0.489
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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