STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL8A1Collagen type VIII alpha 1 chain. (744 aa)    
Predicted Functional Partners:
I3K320_ORENI
LAM_G_DOMAIN domain-containing protein.
 
  
  0.890
I3KIR3_ORENI
LAM_G_DOMAIN domain-containing protein.
 
  
  0.654
ENSONIP00000048514
annotation not available
  
     0.474
ENSONIP00000060269
LOW QUALITY PROTEIN: uncharacterized protein LOC109197456.
 
 
 
 0.466
I3JR82_ORENI
Uncharacterized protein.
  
0.434
col8a2
Collagen, type VIII, alpha 2.
  
  
 
0.430
Tep1
Telomerase protein component 1 isoform X1.
    
 0.415
ENSONIP00000063288
annotation not available
 
      0.407
LOC100700514
Collagen, type VI, alpha 2.
  
0.404
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.